Fatema Binte Alam

Mrs. Fatema Binte Alam

Executive Engineer , findsBD

Research Focus & Metrics

Academic Career Length

4Years (2023-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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2 May 2023 in Computers
Verified
Journal Article
Open access
PDF file
PPPrajoy Podder
Prajoy Podder
FAFatema Binte Alam
Fatema Binte Alam
MMM. Rubaiyat Hossain Mondal
M. Rubaiyat Hossain Mondal
Md Junayed HasanMd Junayed Hasan
Md Junayed Hasan
Ali RohanAli Rohan
Ali Rohan
Subrato BharatiSubrato Bharati
Subrato Bharati
Due to its high transmissibility, the COVID-19 pandemic has placed an unprecedented burden on healthcare systems worldwide. X-ray imaging of the chest has emerged as a valuable and cost-effective tool for detecting and diagnosing COVID-19 patients. In this study, we developed a deep learning model using transfer learning with optimized DenseNet-169 and DenseNet-201 models for three-class classification, utilizing the Nadam optimizer. We modified the traditional DenseNet architecture and tuned the hyperparameters to improve the model’s performance. The model was evaluated on a novel dataset of 3312 X-ray images from publicly available datasets, using metrics such as accuracy, recall, precision, F1-score, and the area under the receiver operating characteristics curve. Our results showed impressive detection rate accuracy and recall for COVID-19 patients, with 95.98% and 96% achieved using DenseNet-169 and 96.18% and 99% using DenseNet-201. Unique layer configurations and the Nadam optimization algorithm enabled our deep learning model to achieve high rates of accuracy not only for detecting COVID-19 patients but also for identifying normal and pneumonia-affected patients. The model’s ability to detect lung problems early on, as well as its low false-positive and false-negative rates, suggest that it has the potential to serve as a reliable diagnostic tool for a variety of lung diseases.


13 September 2024 in IEEE Access
Verified
Journal Article
Open access
TFTahasin Ahmed Fahim
Tahasin Ahmed Fahim
FAFatema Binte Alam
Fatema Binte Alam
KAKazi Tanvir Ahmmed
Kazi Tanvir Ahmmed
This paper introduces OVANet, a new deep learning framework for the diagnosis and classification of ovarian cancer subtypes from histopathological images. OVANet has been designed by integrating modified VGG19 and InceptionV3 blocks, incorporating dual attention mechanism (Squeeze-and-Excitation and custom spatial attention) to capture rich, multi-scale, and context-aware feature representations. This unique architecture combines intermediate layers from both base models, along with additional convolutional and max-pooling layers, dual attention mechanisms and global average pooling to extract diverse image features crucial for accurate subtype differentiation. OVANet is trained and evaluated on an original dataset of 508 histopathological images, augmented to approximately 13,024 images through preprocessing and augmentation techniques like rotations, shifts, zooms, and flips. This approach significantly enhances the generalization capabilities of the model, enabling it to achieve superior performance compared to well-known pretrained models and existing research outputs. The propose model shows accuracy, precision and AUC of 99.01% along with a recall of 99.87%. Using feature map visualization of all layers of the model and a model explainibility technique GRADCam, visual representation of classification have been shown which will help to establish transparency in clinical aspect. This architecture can be considered as a significant advancement in medical imaging, especially for the diagnosis and treatment planning of ovarian cancer. To reduce the death rate of cancer, proper detection is very essential and this model exhibits so promising results that can easily implemented clinically.

11 September 2024 in Information
Verified
Journal Article
Open access
PDF file
FAFatema Binte Alam
Fatema Binte Alam
TFTahasin Ahmed Fahim
Tahasin Ahmed Fahim
MAMd Asef
Md Asef
MHMd. Azad Hossain
Md. Azad Hossain
M. Ali DewanM. Ali Dewan
M. Ali Dewan
Brain tumor detection and categorization of its subtypes are essential for early diagnosis and improving patient outcomes. This research presents a cutting-edge approach that employs advanced data augmentation and deep learning methodologies for brain tumor classification. For this work, a dataset of 6982 MRI images from the IEEE Data Port was considered, in which a total of 5712 images of four classes (1321 glioma, 1339 meningioma, 1595 no tumor, and 1457 pituitary) were used in the training set and a total of 1270 images of the same four classes were used in the testing set. A Wasserstein Generative Adversarial Network was implemented to generate synthetic images to address class imbalance, resulting in a balanced and consistent dataset. A comparison was conducted between various data augmentation metholodogies demonstrating that Wasserstein Generative Adversarial Network-augmented results perform excellently over traditional augmentation (such as rotation, shift, zoom, etc.) and no augmentation. Additionally, a Gaussian filter and normalization were applied during preprocessing to reduce noise, highlighting its superior accuracy and edge preservation by comparing its performance to Median and Bilateral filters. The classifier model combines parallel feature extraction from modified InceptionV3 and VGG19 followed by custom attention mechanisms for effectively capturing the characteristics of each tumor type. The model was trained for 64 epochs using model checkpoints to save the best-performing model based on validation accuracy and learning rate adjustments. The model achieved a 99.61% accuracy rate on the testing set, with precision, recall, AUC, and loss of 0.9960, 0.9960, 0.0153, and 0.9999, respectively. The proposed architecture’s explainability has been enhanced by t-SNE plots, which show unique tumor clusters, and Grad-CAM representations, which highlight crucial areas in MRI scans. This research showcases an explainable and robust approach for correctly classifying four brain tumor types, combining WGAN-augmented data with advanced deep learning models in feature extraction. The framework effectively manages class imbalance and integrates a custom attention mechanism, outperforming other models, thereby improving diagnostic accuracy and reliability in clinical settings.

19 September 2026 in Computers
Verified
Journal Article
Open access
PDF file
TFTahasin Ahmed Fahim
Tahasin Ahmed Fahim
FAFatema Binte Alam
Fatema Binte Alam
MAMd Shamim Ahmed
Md Shamim Ahmed
YJYu Jia
Yu Jia
Deep networks for optical coherence tomography (OCT) classification usually learn directly from image appearance, which leaves coherent speckle, depth-dependent attenuation, point-spread-function blur, and refractive distortion entangled with pathology inside a single feature representation. This work asks whether making that separation architecturally explicit is a useful inductive bias, rather than whether it raises benchmark accuracy. PhysioSpeck-Net routes a shared stem representation through four branches aligned one-to-one with distinct OCT image-formation effects, recombines them through cross-branch attention and a physics-guided gate, and constrains them with auxiliary objectives derived from a seven-layer retinal simulator. The framework is evaluated on a 1000-image balanced test set and, without fine-tuning, on 1400 images from a second OCT source. Under a common training protocol, the model is competitive with substantially larger convolutional and transformer baselines while using 8.80 million parameters, but the more informative results concern reliability: predictive entropy separates errors from correct predictions with error-detection AUCs of 0.9847 and 0.9688, expected calibration error remains near 4–5% on both sets, and Grad-CAM++ perturbation analysis shows that attribution faithfulness is class-dependent rather than uniformly high. Distributional analysis further shows a residual gap between simulated and clinical images. Leave-one-branch-out and loss ablations produced consistent performance reductions, paired significance testing confirmed gains over most conventional baselines, and duplicate-control analysis found no exact or confirmed near-duplicate images across the evaluated datasets. These findings support physics-guided feature separation as a compact and uncertainty-aware strategy for retinal OCT classification under dataset shift.