Background: Progesterone receptor (PR) status plays an important role in guiding hormone therapy decisions in breast cancer. In current practice, PR expression is assessed manually from immunohistochemistry (IHC) slides, which can be time-consuming and may vary between pathologists. This study aims to develop an automated and interpretable framework for PR-IHC analysis to improve consistency and efficiency. Methods: In this work, we developed an AI-assisted pipeline that combines nuclei segmentation, classification, and scoring for PR-IHC images. A fine-tuned Cellpose model was used to segment individual nuclei. The segmented nuclei were then analyzed using a DAB intensity-based approach to classify them into four categories: negative, weak, moderate, and strong. These results were further combined to generate Allred scores. The system was evaluated on 250 PR-IHC images with annotations provided by expert pathologists. Results: The framework achieved strong segmentation performance (F1-score = 0.85, IoU = 0.74) and high classification accuracy (macro F1-score = 0.95). The method also performed well when applied to ER-IHC images without additional retraining. Conclusions: The proposed framework provides a reliable and interpretable approach for automated PR-IHC scoring. It helps reduce manual effort, improves consistency in evaluation, and shows potential for practical use in digital pathology settings.
Background: Accurate differentiation of kidney diseases such as cysts, tumors, stones, and normal tissue from computed tomography (CT) images remains challenging due to overlapping visual characteristics and variability in data distributions. While deep learning approaches have shown promising results, many existing studies rely on image-level data splitting and focus primarily on accuracy, which may lead to overly optimistic performance and limited clinical reliability. Methods: This study proposes KDH-Net (Kidney Disease Hybrid Network), a hybrid deep learning framework for multiclass kidney disease characterization that integrates EfficientNetB0, ResNet50, and MobileNetV2 through feature-level fusion. A two-stage training strategy is adopted to enhance optimization stability. To ensure realistic performance assessment, experiments on the primary dataset are conducted under a patient-level evaluation protocol, eliminating potential data leakage. The framework further incorporates calibration analysis, statistical validation, and explainable artificial intelligence to evaluate prediction reliability and interpretability. Results: On the patient-level dataset, KDH-Net achieves an overall accuracy of 0.93 with a macro-average F1-score of 0.91, demonstrating balanced performance across all classes. Confidence analysis indicates meaningful alignment between prediction confidence and correctness, while Grad-CAM visualizations highlight anatomically relevant regions associated with each class. Conclusions: The results demonstrate that KDH-Net provides a stable, reliable, and interpretable framework for kidney CT characterization. The proposed system is designed to support clinical decision-making by offering trustworthy predictions under realistic evaluation conditions, rather than replacing clinical expertise.
Background: Nasopharyngeal carcinoma (NPC) presents significant diagnostic and therapeutic challenges, often due to late-stage detection and its complex anatomical location. The increasing integration of artificial intelligence (AI) into oncology offers potential opportunities to enhance the precision of NPC management. This systematic review aims to synthesise the current evidence of AI applications in NPC diagnosis, prognostication, and treatment planning. Methods: A systematic literature search was conducted following PRISMA guidelines across multiple databases (PubMed, Scopus, Embase, Google Scholar, IEEE Xplore) for studies published up to June 2025. From an initial pool of 2549 articles, 55 studies meeting the inclusion criteria were selected for qualitative analysis. The review focuses on AI models applied to key diagnostic modalities: computed tomography (CT), magnetic resonance imaging (MRI), and histopathological whole-slide images (WSI). Results: AI, particularly deep learning (DL), shows promising performance in automating critical tasks across all modalities. For CT and MRI, models have been reported to achieve accurate tumor and organ-at-risk segmentation, potentially supporting radiotherapy planning, and show strong performance in predicting survival outcomes and treatment toxicity. In digital pathology, AI enables automated diagnosis and facilitates the extraction of prognostic “pathomic” features from WSIs, with some studies suggesting performance comparable to or exceeding traditional radiomics. The most significant advances are seen in multimodal AI systems that integrate radiological, pathological, and clinical data, which, in some studies, show modest improvements in prognostic performance compared to single-modality approaches. However, these findings are preliminary, as none of the reviewed multimodal models underwent rigorous external validation in large, multi-center cohorts. Reported performance varies considerably across studies, and claims of superiority should be interpreted with caution.
The Travelling Salesman Problem (TSP) asks for the shortest tour that visits each city once and returns to the start. It is a classic NP-hard problem and a benchmark for optimization, logistics, and network design. This paper surveys classical, quantum, and hybrid algorithms for the TSP using clear, step-by-step explanations. We summarize how each method works, what it guarantees, and how it scales with the number of cities. We also discuss practical limits of current quantum hardware and outline open problems and promising research directions. While quantum techniques can speed up certain subroutines or offer strong heuristics, no known method solves general TSP in polynomial time. Our goal is to offer a readable yet rigorous map of the landscape for students and practitioners.
The PR-IHC-40X dataset comprises a high-resolution collection of region-of-interest (ROI) images and corresponding ground-truth (GT) annotations for progesterone receptor (PR) immunohistochemistry (IHC) analysis in breast cancer pathology. We obtained 50 glass slides from the University of Malaya Medical Centre (UMMC) and digitized them into whole-slide images (WSIs) at 40× magnification using a 3DHistech Pannoramic DESK scanner. Pathologists annotated ROIs on the collaborative Cytomine platform, which formed the basis of dataset extraction. Ground-truth masks were generated in a multi-stage process: binary nuclei masks for segmentation were first created with a StarDist deep learning model and refined by manual correction, while the classification ground truth was first determined using a CNN-based approach and then modified by diaminobenzidine (DAB) intensity thresholding into four expression classes: Strong (red), Moderate (yellow), Weak (green), and Negative (blue). The classification outputs were re-corrected in a loop against the pathologists’ feedback and the manually checked results. There were approximately 32,000 nuclei within 250 ROI images that were manually checked and validated by senior pathologists individually. Each ROI comes with its binary segmentation mask and four-class color annotations, which make it a reliable dataset for deep learning research on nuclei segmentation, PR expression classification, and Allred scoring. To ensure a fair and reproducible evaluation, the dataset is released with a predefined slide-level (patient-wise) partition into training, testing, and evaluation subsets so that no slide contributes regions of interest to more than one subset and data leakage across subsets is avoided.
About Me
AI in Medicine, Machine Imaging, Machine Learning, Deep Learning, Bioinformatics.
AI in Medicine, Machine Imaging, Machine Learning, Deep Learning, Bioinformatics.