Salty environments are widely known to be inhospitable to most microorganisms. For centuries salt has been used as a food preservative, while highly saline environments were considered uninhabited by organisms, and if habited, only by prokaryotic ones. Nowadays, we know that filamentous fungi are widespread in many saline habitats very often characterized also by other extremes, for example, very low or high temperature, lack of light, high pressure, or low water activity. However, fungi are still the least understood organisms among halophiles, even though they have been shown to counteract these unfavorable conditions by producing multiple secondary metabolites with interesting properties or unique biomolecules as one of their survival strategies. In this review, we focused on biomolecules obtained from halophilic filamentous fungi such as enzymes, pigments, biosurfactants, and osmoprotectants.

Mucor circinelloides IBT-83 mycelium that exhibits both lipolytic (A_L) and chitosanolytic (A_CH) activities was immobilized into polyurethane foam in a 30 L laboratory fermenter. The process of immobilization was investigated in terms of the carrier porosity, its type, amount, and shape, location inside the fermenter, mixing, and aeration parameters during the culture, as well as downstream processing operations. The selected conditions allowed for immobilization of approximately 7 g of defatted and dried mycelium in 1 g of carrier, i.e., seven times more than achievable in 1 L shake-flasks. Enzymatic preparation obtained by this method exhibited both the chitosanolytic (A_CH 432.5 ± 6.8 unit/g) and lipolytic (A_L 150.0 ± 9.3 U/g) activities. The immobilized preparation was successfully used in chitosan hydrolysis to produce chitooligosaccharides and low molecular weight chitosan, as well as in waste fats degradation and in esters synthesis in nonaqueous media. It was found that the half-life of immobilized preparations stored at room temperature is on average of 200 days.

Chitosan oligosaccharides (COS) have great potential for applications in several fields, including agriculture, food industry or medicine. Nevertheless, the large-scale use of COS requires the development of cost-effective technologies for their production. The main objective of our investigation was to develop an effective method of enzymatic degradation of chitosan in a column reactor using Mucor circinelloides IBT-83 cells, immobilized in a polyurethane foam (PUF). These cells serve as a source of chitosanolytic enzymes. The study revealed that the process of freeze-drying of immobilized mycelium increases the stability of the associated enzymes during chitosan hydrolysis. The use of stabilized preparations as an active reactor bed enables the production of COS at a constant level for 16 reactor cycles (384 h in total), i.e. 216 h longer compared to non-stabilized mycelium. In the hydrolysate, oligomers ranging in structure from dimer to hexamer as well as D-glucosamine were detected. The potential application of the obtained product in agriculture has been verified. The results of phytotests have demonstrated that the introduction of COS into the soil at a concentration of 0.01 or 0.05% w/w resulted in an increase in the growth of Lepidium sativum stem and root, respectively (extensions by 38 and 44% compared to the control sample). The research has verified that the PUF-immobilized M. circinelloides IBT-83 mycelium, which has been stabilized through freeze-drying, is a promising biocatalyst for the environmentally friendly and efficient generation of COS. This biocatalyst has the potential to be used in fertilizers.

The poultry industry produces significant quantities of keratin-rich waste, primarily feathers, whose traditional disposal methods—incineration or chemical treatment—result in environmental damage and resource depletion. This research introduces a sustainable biotechnological method for the valorization of feather waste utilizing Gordonia alkanivorans S7, an actinomycete strain extracted from petroleum plant sludge. This is the inaugural publication illustrating keratinolytic activity in the Gordonia genus. The optimization of the degradation process via the Taguchi approach led to the effective biodegradation of untreated home chicken feathers, achieving dry mass loss of up to 99% after 168 h in a mineral medium. The agricultural potential of the obtained keratin hydrolysate, which was high in organic components (C 31.2%, N 8.9%, H 5.1%, and S 1.7%), was assessed. Phytotoxicity tests demonstrated that the feather hydrolysate led to better growth of the indicator plants—Sorghum saccharatum and Lepidium sativum. The highest values of root growth stimulation were 26% for S. saccharatum and 31% for L. sativum, at a dose of 0.01%. Shoot growth stimulation was noted only for L. sativum, reaching 38% (0.01%), 53% (0.05%), and 37% (0.1%), as compared to the control sample. These results demonstrate the process’s combined economic and environmental benefits, providing a fresh approach to the production of bio-based plant biostimulants and sustainable keratin waste management.

Creosote oil, a byproduct of coal distillation, is primarily composed of aromatic compounds that are difficult to degrade, such as polycyclic aromatic hydrocarbons, phenolic compounds, and N-, S-, and O-heterocyclic compounds. Despite its toxicity and carcinogenicity, it is still often used to impregnate wood, which has a particularly negative impact on the condition of the soil in plants that impregnate wooden materials. Therefore, a rapid, effective, and eco-friendly technique for eliminating the creosote in this soil must be developed. The research focused on obtaining a preparation of Bjerkandera adusta DSM 3375 mycelium immobilized in polyurethane foam (PUF). It contained mold cells in the amount of 1.10 ± 0.09 g (DW)/g of the carrier. The obtained enzyme preparation was used in the bioremediation of soil contaminated with creosote (2% w/w). The results showed that applying the PUF-immobilized mycelium of B. adusta DSM 3375 over 5, 10, and 15 weeks of bioremediation, respectively, removed 19, 30, and 35% of creosote from the soil. After 15 weeks, a 73, 79, and 72% level of degradation of fluoranthene, pyrene, and fluorene, respectively, had occurred. The immobilized cells have the potential for large-scale study, since they can degrade creosote oil in soil.

The increasing environmental issue related to textile waste, especially synthetic fibers treated with acrylic resins, demands the creation of sustainable recycling techniques. Biotechnological methods, such as microbial degradation, present a viable solution for the elimination of these coatings and the recovery of important fibers. This study investigates the potential of a biotechnological approach for the removal of acrylic resins from coated woven textile wastes. The biodegradation process of coated woven fabric after the pretreatment at a high temperature (121 °C) or 6% H₂O₂ was performed using the hydrocarbon-degrading bacterial strain Gordonia alkanivorans S7. Over a 72 h biodegradation period, an increase in emulsifying and esterase activities was observed. A reduction mass of the coated textile waste by up to 7 wt% was achieved, and the elimination of acrylic resin was confirmed through FTIR analysis. The findings indicate the usefulness of the biotechnological method in eliminating acrylic resin from textile waste, presenting a viable strategy for polyester fiber recovery and substantially mitigating its environmental impact.