Simon Tupin

Dr. Simon Tupin

Imperial College London, London, City of London, UK
orcid

Research Focus & Metrics

Academic Career Length

15Years (2012-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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22 January 2021 in Communications Biology
Verified
Journal Article
Open access
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GLGaoyang Li
Gaoyang Li
HWHaoran Wang
Haoran Wang
MZMingzi Zhang
Mingzi Zhang
Simon TupinSimon Tupin
Simon Tupin
AQAike Qiao
Aike Qiao
HAHitomi Anzai
Hitomi Anzai
The clinical treatment planning of coronary heart disease requires hemodynamic parameters to provide proper guidance. Computational fluid dynamics (CFD) is gradually used in the simulation of cardiovascular hemodynamics. However, for the patient-specific model, the complex operation and high computational cost of CFD hinder its clinical application. To deal with these problems, we develop cardiovascular hemodynamic point datasets and a dual sampling channel deep learning network, which can analyze and reproduce the relationship between the cardiovascular geometry and internal hemodynamics. The statistical analysis shows that the hemodynamic prediction results of deep learning are in agreement with the conventional CFD method, but the calculation time is reduced 600-fold. In terms of over 2 million nodes, prediction accuracy of around 90%, computational efficiency to predict cardiovascular hemodynamics within 1 second, and universality for evaluating complex arterial system, our deep learning method can meet the needs of most situations.

18 June 2019 in Journal of Cerebral Blood Flow & Metabolism
Verified
Journal Article
Open access
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Khalid M. SaqrKhalid M. Saqr
Khalid M. Saqr
SRSherif Rashad
Sherif Rashad
Simon TupinSimon Tupin
Simon Tupin
KNKuniyasu Niizuma
Kuniyasu Niizuma
THTamer Hassan
Tamer Hassan
MOMakoto Ohta
Makoto Ohta
Despite the plethora of published studies on intracranial aneurysms (IAs) hemodynamic using computational fluid dynamics (CFD), limited progress has been made towards understanding the complex physics and biology underlying IA pathophysiology. Guided by 1733 published papers, we review and discuss the contemporary IA hemodynamics paradigm established through two decades of IA CFD simulations. We have traced the historical origins of simplified CFD models which impede the progress of comprehending IA pathology. We also delve into the debate concerning the Newtonian fluid assumption used to represent blood flow computationally. We evidently demonstrate that the Newtonian assumption, used in almost 90% of studies, might be insufficient to describe IA hemodynamics. In addition, some fundamental properties of the Navier–Stokes equation are revisited in supplementary material to highlight some widely spread misconceptions regarding wall shear stress (WSS) and its derivatives. Conclusively, our study draws a roadmap for next-generation IA CFD models to help researchers investigate the pathophysiology of IAs.

23 September 2020 in Scientific Reports
Verified
Journal Article
Open access
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Khalid M. SaqrKhalid M. Saqr
Khalid M. Saqr
Simon TupinSimon Tupin
Simon Tupin
SRSherif Rashad
Sherif Rashad
TEToshiki Endo
Toshiki Endo
KNKuniyasu Niizuma
Kuniyasu Niizuma
MOMakoto Ohta
Makoto Ohta
Contemporary paradigm of peripheral and intracranial vascular hemodynamics considers physiologic blood flow to be laminar. Transition to turbulence is considered as a driving factor for numerous diseases such as atherosclerosis, stenosis and aneurysm. Recently, turbulent flow patterns were detected in intracranial aneurysm at Reynolds number below 400 both in vitro and in silico. Blood flow is multiharmonic with considerable frequency spectra and its transition to turbulence cannot be characterized by the current transition theory of monoharmonic pulsatile flow. Thus, we decided to explore the origins of such long-standing assumption of physiologic blood flow laminarity. Here, we hypothesize that the inherited dynamics of blood flow in main arteries dictate the existence of turbulence in physiologic conditions. To illustrate our hypothesis, we have used methods and tools from chaos theory, hydrodynamic stability theory and fluid dynamics to explore the existence of turbulence in physiologic blood flow. Our investigation shows that blood flow, both as described by the Navier–Stokes equation and in vivo, exhibits three major characteristics of turbulence. Womersley’s exact solution of the Navier–Stokes equation has been used with the flow waveforms from HaeMod database, to offer reproducible evidence for our findings, as well as evidence from Doppler ultrasound measurements from healthy volunteers who are some of the authors. We evidently show that physiologic blood flow is: (1) sensitive to initial conditions, (2) in global hydrodynamic instability and (3) undergoes kinetic energy cascade of non-Kolmogorov type. We propose a novel modification of the theory of vascular hemodynamics that calls for rethinking the hemodynamic–biologic links that govern physiologic and pathologic processes.

8 January 2020 in Journal of Cellular Physiology
Verified
Journal Article
Closed access
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SRSherif Rashad
Sherif Rashad
XHXiaobo Han
Xiaobo Han
KSKhalid Saqr
Khalid Saqr
Simon TupinSimon Tupin
Simon Tupin
MOMakoto Ohta
Makoto Ohta
TTTeiji Tominaga
Teiji Tominaga


1 September 2014 in Journal of the Mechanical Behavior of Biomedical Materials
Verified
Journal Article
Closed access
CPC. Pailler-Mattei
C. Pailler-Mattei
LLL. Laquièze
L. Laquièze
RDR. Debret
R. Debret
Simon TupinSimon Tupin
Simon Tupin
GAG. Aimond
G. Aimond
HZH. Zahouani
H. Zahouani