Sher Ali

Dr. Sher Ali

Universidade de São Paulo, São Paulo, Brazil
orcid

Research Focus & Metrics

Academic Career Length

13Years (2014-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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15 September 2022 in Frontiers in Plant Science
Verified
Journal Article
Open access
Muhammad Siddique AfridiMuhammad Siddique Afridi
Muhammad Siddique Afridi
MJMuhammad Ammar Javed
Muhammad Ammar Javed
Sher AliSher Ali
Sher Ali
FMFlavio Henrique Vasconcelos De Medeiros
Flavio Henrique Vasconcelos De Medeiros
BABaber Ali
Baber Ali
Gustavo SantoyoGustavo Santoyo
Gustavo Santoyo
Plant microbiome (or phytomicrobiome) engineering (PME) is an anticipated untapped alternative strategy that could be exploited for plant growth, health and productivity under different environmental conditions. It has been proven that the phytomicrobiome has crucial contributions to plant health, pathogen control and tolerance under drastic environmental (a)biotic constraints. Consistent with plant health and safety, in this article we address the fundamental role of plant microbiome and its insights in plant health and productivity. We also explore the potential of plant microbiome under environmental restrictions and the proposition of improving microbial functions that can be supportive for better plant growth and production. Understanding the crucial role of plant associated microbial communities, we propose how the associated microbial actions could be enhanced to improve plant growth-promoting mechanisms, with a particular emphasis on plant beneficial fungi. Additionally, we suggest the possible plant strategies to adapt to a harsh environment by manipulating plant microbiomes. However, our current understanding of the microbiome is still in its infancy, and the major perturbations, such as anthropocentric actions, are not fully understood. Therefore, this work highlights the importance of manipulating the beneficial plant microbiome to create more sustainable agriculture, particularly under different environmental stressors.

15 September 2022 in Microbiological Research
Verified
Journal Article
Closed access
Muhammad Siddique AfridiMuhammad Siddique Afridi
Muhammad Siddique Afridi
AFAli Fakhar
Ali Fakhar
AKAshwani Kumar
Ashwani Kumar
Sher AliSher Ali
Sher Ali
FMFlavio H.V. Medeiros
Flavio H.V. Medeiros
MSMuhammad Saleem
Muhammad Saleem

7 December 2022 in Biology
Verified
Journal Article
Open access
PDF file
Muhammad Siddique AfridiMuhammad Siddique Afridi
Muhammad Siddique Afridi
Sher AliSher Ali
Sher Ali
ASAbdul Salam
Abdul Salam
WTWillian César Terra
Willian César Terra
AHAqsa Hafeez
Aqsa Hafeez
RKRohini Karunakaran
Rohini Karunakaran
Rhizosphere microbiome is a dynamic and complex zone of microbial communities. This complex plant-associated microbial community, usually regarded as the plant’s second genome, plays a crucial role in plant health. It is unquestioned that plant microbiome collectively contributes to plant growth and fitness. It also provides a safeguard from plant pathogens, and induces tolerance in the host against abiotic stressors. The revolution in omics, gene-editing and sequencing tools have somehow led to unravel the compositions and latent interactions between plants and microbes. Similarly, besides standard practices, many biotechnological, (bio)chemical and ecological methods have also been proposed. Such platforms have been solely dedicated to engineer the complex microbiome by untangling the potential barriers, and to achieve better agriculture output. Yet, several limitations, for example, the biological obstacles, abiotic constraints and molecular tools that capably impact plant microbiome engineering and functionality, remained unaddressed problems. In this review, we provide a holistic overview of plant microbiome composition, complexities, and major challenges in plant microbiome engineering. Then, we unearthed all inevitable abiotic factors that serve as bottlenecks by discouraging plant microbiome engineering and functionality. Lastly, by exploring the inherent role of micro/macrofauna, we propose economic and eco-friendly strategies that could be harnessed sustainably and biotechnologically for resilient plant microbiome engineering.

29 November 2023 in Foods
Verified
Journal Article
Open access
PDF file
Sher AliSher Ali
Sher Ali
LFLucas Gabriel Dionisio Freire
Lucas Gabriel Dionisio Freire
Vanessa Theodoro RezendeVanessa Theodoro Rezende
Vanessa Theodoro Rezende
MNMuhammad Noman
Muhammad Noman
SUSana Ullah
Sana Ullah
Carlos Augusto Fernandes de OliveiraCarlos Augusto Fernandes de Oliveira
Carlos Augusto Fernandes de Oliveira
In this review, the intricate issue about the occurrence levels of mycotoxins in foods is discussed aiming to underline the main knowledge gaps on the persistence of these toxicants in the food production system. Mycotoxins have been a key challenge to the food industry, economic growth, and consumers’ health. Despite a breadth of studies over the past decades, the persistence of mycotoxins in foods remain an overlooked concern that urges exploration. Therefore, we aimed to concisely underline the matter and provide possible biochemical and metabolic details that can be relevant to the food sector and overall public health. We also stress the application of computational modeling, high-throughput omics, and high-resolution imaging approaches, which can provide insights into the structural and physicochemical characteristics and the metabolic activities which occur in a stored cereal grain’s embryo and endosperm and their relationship with storage fungi and mycotoxins on a cellular level. In addition, there is a need for extensive collaborative network and funding, which will play a key role in finding effective solutions against the persistence of mycotoxins at the genetic and molecular to metabolic levels in the food system.

1 January 2019 in Polish Journal of Microbiology
Verified
Journal Article
Open access
PDF file
ABAbdullah
Abdullah
Sher AliSher Ali
Sher Ali
MSMuhammad Salman
Muhammad Salman
MDMisbahud Din
Misbahud Din
KKKachkol Khan
Kachkol Khan
MAMuhammad Arif
Muhammad Arif
The current study is a retrospective epidemic report regarding dengue fever (DF) virus infection cases (2017) from fifteen districts of KPK, Pakistan. Medical records of 120 948 patients were reviewed retrospectively for demographic, clinical and laboratory data. The presence of dengue infection was confirmed by NS1-ELISA and RT-PCR, respectively. The total positive cases (of suspected DF samples) were 24 938 (20.6%), whereas seventy cases (0.28%) had a fatal outcome. Mean age ± SD of the dengue patients was 26 ± 19.8 years, while; the most affected age group was from 16 to 30 years (Chi-square: 12 820.125, p: 0.00). The infected males were 65.3%, and that of the female was 34.7%. All the dengue-infected patients were observed with symptoms of severe fever (100%), body aches (95%), gums and nose bleeding (5%), skin rashes (30%), vomiting (70%). The highest infection rate was found in district Peshawar and that of the lowest was in Bannu, Hungu and Luki Marwat. A high rate of dengue infection was found in post-monsoon months i.e. October (41%) and September (32%) of the year. The results proved that if the dengue outbreaks reveal further in KPK, it could alarmingly increase the mortality rate. Therefore, the Department of Public Health in KPK, Pakistan may take proper measures to avoid and control dengue epidemics in the future.

21 November 2022 in Dairy
Verified
Journal Article
Open access
PDF file
CCCarlos Corassin
Carlos Corassin
ABAline Borowsky
Aline Borowsky
Sher AliSher Ali
Sher Ali
RRRoice Rosim
Roice Rosim
Carlos Augusto Fernandes de OliveiraCarlos Augusto Fernandes de Oliveira
Carlos Augusto Fernandes de Oliveira
The aim of this study was to conduct an up-to-date investigation on the occurrence levels of aflatoxin M1 (AFM1) in samples of raw milk (n = 40), pasteurized milk (n = 44), ultra-high temperature (UHT) milk (n = 27), Minas cheese (n = 57), and yogurt (n = 44) traded in São Paulo state, Brazil. AFM1 was extracted from fluid milks and dairy products using immunoaffinity columns and determined by high performance liquid chromatography. AFM1 was detected at the mean level of 0.080 ± 0.071 µg/L or kg in 72 samples (34.0%) evaluated in the study (n = 212). Detectable levels of AFM1 were observed in five samples of raw milk (12.5%), 16 samples of pasteurized milk (36.4%), 13 samples of UHT milk (48.1%), 27 samples of cheese (47.4%), and 11 samples of yogurt (25.0%), although none of them had concentrations above the maximum permitted levels (MPL) for AFM1 adopted in Brazil. However, 11.7% (n = 13) of samples of raw, pasteurized, and UHT milks would have AFM1 concentrations above the MPL of 0.05 μg/L adopted in the EU. The maximum level was detected in one cheese sample containing 0.695 µg/kg. Although none of the samples exceeded the Brazilian MPL, the high frequencies of AFM1 in Brazilian milk products warrant concern about their contribution to the human exposure to aflatoxins. Because aflatoxins are among the most potent carcinogens known, the results of this trial stress the need for stringent measures in the milk production system to avoid AFM1 in milk and derived products.