Phytopathogens are among the major biotic stressors limiting global crop productivity. Conventional control methods, including chemical pesticides and fungicides, have contributed to pathogen resistance, environmental pollution, and soil degradation, highlighting the need for sustainable alternatives. This review highlights innovative, eco-friendly strategies that exploit plant–microbe interactions to enhance plant health and resilience across diverse agroecosystems. Rhizosphere-, phyllosphere-, and endosphere-associated microbial assemblages contribute to plant immune enhancement through induced systemic resistance, competitive nutrient exclusion, antimicrobial metabolite production, and mycoparasitism. The review emphasizes the functional roles of beneficial microbial communities and the emerging applications of synthetic consortia and bio-organic fertilizers to improving disease suppression, nutrient use efficiency, and soil fertility. In addition, recent progress in omics-based tools and microbial formulation technologies is discussed as a key driver for translating laboratory findings into practical field applications. However, large-scale implementation remains challenged by high research costs, limited metagenomic infrastructure, and the lack of standardized microbial formulations across environments. Strengthening institutional capacity, integrating omics-based tools, and improving technology transfer will be essential to unlock the full potential of microbiome-based pathogen control. Overall, this review highlights microbiome-based interventions as a sustainable alternative to chemical-intensive plant protection strategies under changing environmental conditions.

This review investigates the multifaceted roles of nitrogen-fixing and phosphate-mobilizing bacteria in natural ecosystems, with a particular focus on their contributions to plant growth and sustainable soil management. These microbial communities contribute substantially to nutrient cycling by converting atmospheric nitrogen into plant-available forms and mobilizing insoluble phosphorus in soil, thereby enhancing soil fertility and promoting sustainable plant productivity. This review synthesizes current knowledge on the mechanisms underlying biological nitrogen fixation, phosphate solubilization and mineralization, and the production of plant growth–promoting metabolites. Particular attention is given to plant–microbe interactions and their role in improving nutrient availability, regulating plant physiological processes, and enhancing tolerance to abiotic stresses such as salinity, drought, and heavy metal contamination. The findings underscore the ecological importance of these plant-associated microbial communities and highlight their potential applications in biofertilizer and biostimulant development for sustainable agriculture and reduced dependence on synthetic fertilizers.

Microalgae in planktonic communities are the main producers of biomass in lake ecosystems; however, their stability is influenced by many environmental factors. This study aims to assess the ecological state of Lake Maybalyk, located in Astana (Kazakhstan), based on the study of the taxonomic diversity and structure of phytoplankton, zooplankton, and the physico-chemical properties of the water. From 2019 to 2021, samples were taken for phytoplankton analysis, hydrochemical analysis of the water, zooplankton, and saprobiological analysis of the algocenosis. The study also investigated the main morphometric parameters of the lake, as well as the composition of hydrobionts, such as zooplankton, zoobenthos, and ichthyofauna. The analysis of phytoplankton revealed the presence of 97 species and intraspecific taxa of microalgae, with 71 types of microalgal indicators indicating water saprobity. The planktonic algoflora in Lake Maybalyk is predominantly composed of diatoms (Bacillariophyta) and green algae (Chlorophyta), which play a vital role in oxygen production and the food chain within the reservoir. Based on the Pantle–Buck saprobity index (2.15–2.5), the water quality in Lake Maybalyk is classified as moderately polluted. The assessment of the water quality, considering the number and composition of indicator phytoplankton species, places Lake Maybalyk in class III (β-mesosaprobic). The hydrochemical indicators align with the hydrobiological indicators, confirming the water quality as class III. The trophic status of the reservoir, during the study period, can be described as average. The obtained data on both the hydrobiological and hydrochemical indicators correlate, suggesting satisfactory water quality and the ability of the reservoir to purify itself. This study contributes to the sustainable management of water resources, by providing essential data on the ecological state of Lake Maybalyk. The results underscore the importance of continuous biomonitoring, with microalgae as indicators of water quality, which is crucial for developing effective ecosystem conservation strategies.

The increasing volume of wastewater discharged in urban areas poses a significant environmental challenge, particularly due to the potential for organic carbon overload in aquatic ecosystems. This study aimed to identify bacterial isolates with the potential to mitigate this burden by effectively...

The emergence of antibiotic-resistant pathogens in clinical settings has intensified the search for new probiotic strains with both health benefits and technological utility. This study aims to identify and characterize promising antimicrobial cultures derived from milk and dairy products, capable of inhibiting opportunistic pathogens. The samples of dairy products were collected from various markets across Kazakhstan. Microorganisms isolated from these samples underwent identification through 16S rRNA and ITS gene sequencing, using the BLAST algorithm. Their antimicrobial activity was assessed using the delayed antagonism method against pathogenic microorganisms including E. coli, S. aureus, Pseudomonas sp., Candida sp., and B. subtilis. Additionally, the isolates were evaluated for resistance to environmental stress factors such as temperature, pH, salt, ethanol, glucose, and peroxide. From 24 distinct samples, 33 isolates were purified, with 15 demonstrating high viability (10⁸–10⁹ CFU/mL) and stress resistance. Notably, Lacticaseibacillus casei AK and Enterococcus faecium KS exhibited resistance to all tested stress conditions. Antimicrobial screening revealed strong activity by strains LP, LB, and S-2 against multiple pathogens. Genotyping and carbohydrate fermentation tests identified these effective isolates as belonging to the genera Lactobacillus, Lactococcus, Enterococcus, Lactiplantibacillus, Streptococcus, and the yeast genus Pichia. This study underscores the industrial and health potential of the identified microorganisms. Prominent among the strains, Lactiplantibacillus pentosus LP, Lacticaseibacillus casei AK, Lactiplantibacillus argentoratensis LB, Lactiplantibacillus plantarum S-2, and Enterococcus faecium KS have been recognized as potent probiotics. These strains exhibit broad-spectrum antimicrobial activity coupled with robust stress tolerance, making them suitable candidates for probiotic applications.

Wastewater treatment is one of the key problems that has to be solved by environmental biotechnology. Wastewater bioremediation is one of the most efficient and safest methods to replenish water resources. The aim of this study is to investigate the potential of using bacterial consortiums for reducing the organic load in wastewater, specifically focusing on water samples collected from three water bodies in central and northern Kazakhstan, which are known for their high levels of organic pollution. This study utilized bacterial strains from a microorganism collection to create consortiums. These consortiums were used to treat wastewater from polluted water bodies in Kazakhstan, focusing on parameters like COD, BOD5, ammonia, and phosphate. The methodology involved culturing strains, collecting water samples, and analyzing various parameters. Statistical analysis was performed to assess the results. The study found that two bacterial consortiums, 7BLB and 7BLPA, were the most effective in reducing COD, ammonia, and ammonia nitrogen in wastewater. The consortium 6BLP was highly effective at reducing phosphate levels, surpassing acceptable standards. Hydrogen levels met regulatory requirements in all cases. The study recommends further investigation of these consortiums’ impact on other water quality indicators and suggests conducting field experiments in natural water ponds.