Ali Anil Demircali

Dr. Ali Anil Demircali

orcid

Research Focus & Metrics

Academic Career Length

10Years (2017-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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19 January 2024 in Science Advances
Verified
Journal Article
Open access
MAMohamed E. M. K. Abdelaziz
Mohamed E. M. K. Abdelaziz
JZJinshi Zhao
Jinshi Zhao
BRBruno Gil Rosa
Bruno Gil Rosa
HLHyun-Taek Lee
Hyun-Taek Lee
DSDaniel Simon
Daniel Simon
Burak TemelkuranBurak Temelkuran
Burak Temelkuran
Precise manipulation of flexible surgical tools is crucial in minimally invasive surgical procedures, necessitating a miniature and flexible robotic probe that can precisely direct the surgical instruments. In this work, we developed a polymer-based robotic fiber with a thermal actuation mechanism by local heating along the sides of a single fiber. The fiber robot was fabricated by highly scalable fiber drawing technology using common low-cost materials. This low-profile (below 2 millimeters in diameter) robotic fiber exhibits remarkable motion precision (below 50 micrometers) and repeatability. We developed control algorithms coupling the robot with endoscopic instruments, demonstrating high-resolution in situ molecular and morphological tissue mapping. We assess its practicality and safety during in vivo laparoscopic surgery on a porcine model. High-precision motion of the fiber robot delivered endoscopically facilitates the effective use of cellular-level intraoperative tissue identification and ablation technologies, potentially enabling precise removal of cancer in challenging surgical sites.

18 December 2024 in Small
Verified
Journal Article
Open access
MTMingzhen Tian
Mingzhen Tian
MKMeysam Keshavarz
Meysam Keshavarz
ADAli Anil Demircali
Ali Anil Demircali
Bing HanBing Han
Bing Han
GYGuang‐Zhong Yang
Guang‐Zhong Yang
Triple‐negative breast cancer (TNBC), characterized by its aggressive metastatic propensity and lack of effective targeted therapeutic options, poses a major challenge in oncological management. A proof‐of‐concept neoadjuvant strategy aimed at inhibiting TNBC tumor growth and mitigating metastasis through a localized delivery of chemotherapeutics is reported in this paper. This approach addresses the limitations in payload capacity and stimuli responsiveness commonly associated with microrobotics in oncology. A hydrogel‐based system is developed for the immobilization of chemotherapeutic agents, subsequently encapsulated within magnetically responsive microrobots. This design leverages external magnetic fields to facilitate the precise navigation and localization of the therapeutic agents directly to the tumor site. The efficacy of this approach is demonstrated in an animal model, in which a significant 14‐fold reduction in tumor size and suppression of metastasis to critical organs such as the liver and lungs are observed. Crucially, the drug release mechanism is engineered to be responsive to the tumor microenvironment and is regulated by the overexpression of the enzymatic activity of matrix metalloproteinases (MMP2 and MMP9) in TNBC tumors, triggering the degradation of the hydrogel matrix, leading to controlled release of the immobilized therapeutic drug. This ensures that the therapeutic action is localized, reducing systemic toxicity and enhancing treatment efficacy. These findings suggest that this neoadjuvant approach holds promise for broader applications in other cancer types.

30 August 2022 in Journal of Clinical Medicine
Verified
Journal Article
Open access
PDF file
AYAbdurrahim Yilmaz
Abdurrahim Yilmaz
GGGülsüm Gençoğlan
Gülsüm Gençoğlan
RVRahmetullah Varol
Rahmetullah Varol
ADAli Anil Demircali
Ali Anil Demircali
MKMeysam Keshavarz
Meysam Keshavarz
HUHuseyin Uvet
Huseyin Uvet
Dermoscopy is the visual examination of the skin under a polarized or non-polarized light source. By using dermoscopic equipment, many lesion patterns that are invisible under visible light can be clearly distinguished. Thus, more accurate decisions can be made regarding the treatment of skin lesions. The use of images collected from a dermoscope has both increased the performance of human examiners and allowed the development of deep learning models. The availability of large-scale dermoscopic datasets has allowed the development of deep learning models that can classify skin lesions with high accuracy. However, most dermoscopic datasets contain images that were collected from digital dermoscopic devices, as these devices are frequently used for clinical examination. However, dermatologists also often use non-digital hand-held (optomechanical) dermoscopes. This study presents a dataset consisting of dermoscopic images taken using a mobile phone-attached hand-held dermoscope. Four deep learning models based on the MobileNetV1, MobileNetV2, NASNetMobile, and Xception architectures have been developed to classify eight different lesion types using this dataset. The number of images in the dataset was increased with different data augmentation methods. The models were initialized with weights that were pre-trained on the ImageNet dataset, and then they were further fine-tuned using the presented dataset. The most successful models on the unseen test data, MobileNetV2 and Xception, had performances of 89.18% and 89.64%. The results were evaluated with the 5-fold cross-validation method and compared. Our method allows for automated examination of dermoscopic images taken with mobile phone-attached hand-held dermoscopes.

14 March 2018 in Micromachines
Verified
Journal Article
Open access
PDF file
HUHuseyin Uvet
Huseyin Uvet
ADAli Anil Demircali
Ali Anil Demircali
YKYusuf Kahraman
Yusuf Kahraman
RVRahmetullah Varol
Rahmetullah Varol
TKTunc Kose
Tunc Kose
KEKadir Erkan
Kadir Erkan
A new microrobot manipulation technique with high precision (nano level) positional accuracy to move in a liquid environment with diamagnetic levitation is presented. Untethered manipulation of microrobots by means of externally applied magnetic forces has been emerging as a promising field of research, particularly due to its potential for medical and biological applications. The purpose of the presented method is to eliminate friction force between the surface of the substrate and microrobot. In an effort to achieve high accuracy motion, required magnetic force for the levitation of the microrobot was determined by finite element method (FEM) simulations in COMSOL (version 5.3, COMSOL Inc., Stockholm, Sweden) and verified by experimental results. According to position of the lifter magnet, the levitation height of the microrobot in the liquid was found analytically, and compared with the experimental results head-to-head. The stable working range of the microrobot is between 30 µm to 330 µm, and it was confirmed in both simulations and experimental results. It can follow the given trajectory with high accuracy (<1 µm error avg.) at varied speeds and levitation heights. Due to the nano-level positioning accuracy, desired locomotion can be achieved in pre-specified trajectories (sinusoidal or circular). During its locomotion, phase difference between lifter magnet and carrier magnet has been observed, and relation with drag force effect has been discussed. Without using strong electromagnets or bulky permanent magnets, our manipulation approach can move the microrobot in three dimensions in a liquid environment.

5 January 2021 in IEEE/ASME Transactions on Mechatronics
Verified
Journal Article
Closed access
ADAli Anil Demircali
Ali Anil Demircali
RVRahmetullah Varol
Rahmetullah Varol
GAGizem Aydemir
Gizem Aydemir
ESEda Nur Saruhan
Eda Nur Saruhan
KEKadir Erkan
Kadir Erkan
HUHuseyin Uvet
Huseyin Uvet
This article presents an untethered magnetic manipulation technique for controlling a microrobot position under high rate laminar flows up to 4.5 mL/min. An increase in flow rate exponentially increases the drag force on the microrobot and negatively impacts its positioning accuracy. Increasing the longitudinal force generated by the microrobot’s driving apparatus helps in overcoming the disruptive effects of the fluid flow and increases longitudinal motion stability. To this end, we propose a magnetic configuration with two ring-shaped magnets, one above and the other below the microfluidic channel. This configuration causes the magnetic field lines emanating from the ring-shaped magnets to converge on both sides of the microrobot. Thus, the magnetic trapping forces that hold the microrobot in position are increased. To the best of our knowledge, no prior study exists on investigating the longitudinal motion for high flow velocities ( $>$ 5 mm/s). Investigating the longitudinal forces (along the x -axis) that affect a magnetically driven microrobot is a novel research topic that has many potential application areas, such as cell research, micromanipulation, and lab-on-a-chip systems. The microrobot’s dynamical motion is modeled as a second-order system, and using this model as a guideline, we demonstrate the ability of a microrobot in a square-shaped microfluidic channel ( $900$ $\times 900\,{\mu \text{m}}^{2}$ ) to follow a linear trajectory with a relative velocity up to 132.6 ${\text{mm/s}}$ . A straight and longitudinal trajectory of 4000 $\mu \text{m}$ has been successfully followed in the same and opposite directions to the flow for different flow rates (1–4.5 mL/min) and different robot speeds (10–50 mm/s).

17 July 2023 in Biomedicines
Verified
Journal Article
Open access
PDF file
AAAyhan Aktas
Ayhan Aktas
ADAli Anil Demircali
Ali Anil Demircali
RSRiccardo Secoli
Riccardo Secoli
Burak TemelkuranBurak Temelkuran
Burak Temelkuran
FBFerdinando Rodriguez y Baena
Ferdinando Rodriguez y Baena
In recent years, steerable needles have attracted significant interest in relation to minimally invasive surgery (MIS). Specifically, the flexible, programmable bevel-tip needle (PBN) concept was successfully demonstrated in vivo in an evaluation of the feasibility of convection-enhanced delivery (CED) for chemotherapeutics within the ovine model with a 2.5 mm PBN prototype. However, further size reductions are necessary for other diagnostic and therapeutic procedures and drug delivery operations involving deep-seated tissue structures. Since PBNs have a complex cross-section geometry, standard production methods, such as extrusion, fail, as the outer diameter is reduced further. This paper presents our first attempt to demonstrate a new manufacturing method for PBNs that employs thermal drawing technology. Experimental characterisation tests were performed for the 2.5 mm PBN and the new 1.3 mm thermally drawn (TD) PBN prototype described here. The results show that thermal drawing presents a significant advantage in miniaturising complex needle structures. However, the steering behaviour was affected due to the choice of material in this first attempt, a limitation which will be addressed in future work.