Shafiqul Islam

Dr. Shafiqul Islam


Research Focus & Metrics

Academic Career Length

6Years (2021-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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30 November 2021 in Zoonotic Diseases
Verified
Journal Article
Open access
PDF file
Md. Jannat HossainMd. Jannat Hossain
Md. Jannat Hossain
YAYoussef A Attia
Youssef A Attia
FBFatimah Muhammad Ballah
Fatimah Muhammad Ballah
Md Saiful IslamMd Saiful Islam
Md Saiful Islam
Md. Abdus SoburMd. Abdus Sobur
Md. Abdus Sobur
Md. Tanvir RahmanMd. Tanvir Rahman
Md. Tanvir Rahman
Antimicrobial resistance (AMR) in Salmonella in poultry poses a serious human health threat as it has zoonotic importance. Poultry is often linked with outbreaks of Salmonella-associated foodborne illness. Since antimicrobials are heavily used in poultry in Bangladesh, multidrug-resistant (MDR) Salmonella is quite frequently found there. MDR Salmonella is challenging to treat with antimicrobials and often causes a severe economic loss in the poultry sector. By horizontal gene transfer and/or evolutionary mutations, antimicrobials primarily exert selection pressure that contributes to antimicrobials resistance. In addition, resistance patterns can vary with variations in time and space. Without having prior knowledge of resistance patterns, no effective drugs could be prescribed. Therefore, it is crucial to have updated knowledge on the status of AMR in Salmonella in Bangladesh for effective treatment and management of the flocks against salmonellosis. There are several review articles on AMR in Salmonella in poultry in Bangladesh; they lack the whole scenario of the country and particularly do not have enough data on the poultry environment. Considering this scenario, in this review, we have focused on AMR in Salmonella in poultry in Bangladesh (2011–2021), with particular emphasis on data from the poultry and farm environments on a divisional zone basis.

Verified
Journal Article
Open access
PDF file
STSheikh Anika Tasnim
Sheikh Anika Tasnim
DHDr. Nazia Haque
Dr. Nazia Haque
Shyamal Kumar PaulShyamal Kumar Paul
Shyamal Kumar Paul
MAMeiji Soe Aung
Meiji Soe Aung
MHMd. Rafiul Hasan
Md. Rafiul Hasan
NKNobumichi Kobayashi
Nobumichi Kobayashi
Leptospirosis is a zoonotic disease caused by pathogenic Leptospira, prevalent in tropical/sub-tropical regions. This study aimed to clarify the prevailing leptospiral species, clinical features, and risk factors of leptospirosis in north-central Bangladesh in 2024. Venous blood and urine samples were collected from 117 patients with clinically suspected leptospirosis. Among these cases, 75 (64%) tested positive for Leptospira infection by IgM ELISA test and/or PCR. By phylogenetic analysis of the 16S rRNA gene, all the samples tested were classified into L. wolffii (pathogenic group P2), showing high sequence identity to those of the type strain Khorat-H2 (97–99%) and L. wolffii reported in Bangladesh previously. Confirmed leptospirosis patients were mostly male (93%), aged 15–60 years (93%), living in rural areas in low socioeconomic conditions. Variable symptoms were presented by patients, with jaundice (84%), nausea/vomiting (84%), and myalgia (67%) being common. Some patients showed severe symptoms involving the nervous system (disorientation and neck stiffness) and the respiratory tract (cough, shortness of breath, and hemoptysis). Major risk factors for leptospirosis were exposures to mud/wet soil, sanding water, heavy rain, working in a paddy field, and cattle. In conclusion, L. wolffii was revealed to be circulating endemically in north-central Bangladesh, since its first detection in 2018, associated with variable and severe clinical symptoms in humans.

11 November 2025 in Microbiologyopen
Verified
Journal Article
Open access
SSSaad As Shadique
Saad As Shadique
FFFarhana Binte Ferdous
Farhana Binte Ferdous
NANahid Ashraf
Nahid Ashraf
SRSabrina Sultana Rimi
Sabrina Sultana Rimi
MKMohosin Kabir
Mohosin Kabir
SIShafiqul Islam
Shafiqul Islam
Enterococcus faecalis ( E. faecalis ) is a notable public health bacterium since it can thrive on high‐touch surfaces in restaurants. This study aimed to isolate E. faecalis , conduct antibiogram to determine resistance patterns, explore the virulence profile and observe biofilm‐forming properties. A total of 90 samples were collected from BAU restaurants, including high‐touch surfaces and popular food items. Initial isolation employed culture‐based method followed by Gram's staining technique and biochemical tests. Molecular confirmation was achieved via polymerase chain reaction (PCR) targeting the ddl E. faecalis gene specific for E. faecalis . Antibiogram was performed using the Disc Diffusion Test for commonly used antibiotics. Genotypic detection of antibiotic resistance and virulence profile were also explored by PCR. Lastly, the Congo Red (CR) test was done to examine the biofilm‐forming isolates. Results indicated a prevalence (30%) of E. faecalis in both food and surface samples, with higher contamination rates in crowded areas. Antibiogram revealed high resistance to Penicillin (100%) and moderate to low resistance towards Tetracycline, Ciprofloxacin, Erythromycin and Chloramphenicol. Shockingly, bla TEM gene was found in 81.48% of isolates, and 18.51% were detected as multidrug‐resistant. We found a very high prevalence of the virulence genes fsrA , fsrB , fsrC , gelE , pil , agg, and ace . Finally, the CR test revealed 33.33% and 44.44% isolates as strong and intermediate biofilm formers respectively. This study reinforces the significance of routine surveillance in combating the spread of antimicrobial resistance through the food chain and the prospective use of E. faecalis as a contamination marker.

13 September 2026 in Viruses
Verified
Journal Article
Open access
PDF file
Md Aminul IslamMd Aminul Islam
Md Aminul Islam
SRSaifur Rahman
Saifur Rahman
SIShafiqul Islam
Shafiqul Islam
SRSharmin Aqter Rony
Sharmin Aqter Rony
AGAsep Gunawan
Asep Gunawan
Jasim Muhammad UddinJasim Muhammad Uddin
Jasim Muhammad Uddin
Peste des petits ruminants (PPR) is a highly contagious transboundary viral disease of sheep and goats that causes major economic losses and livelihood disruption across Africa, the Middle East, and Asia. Goats are often more severely affected than sheep, particularly in endemic smallholder systems, where high turnover, nutritional stress, and limited veterinary infrastructure sustain viral transmission. Despite effective live attenuated vaccines and the ongoing FAO–WOAH Global Eradication Programme, PPR remains widely distributed, indicating that vaccination alone is insufficient without understanding of host, viral, and environmental determinants of disease persistence. This review synthesizes current knowledge on three interrelated pillars of PPR prevention and control in goats: epidemiology, immunology, and host genetics. We summarize the epidemiological drivers of PPR transmission and how these factors shape disease burden in endemic settings. We review the immunobiology of PPR virus (PPRV) infection and vaccination, focusing on innate antiviral sensing, adaptive immune protection, virus-induced immunosuppression, and field determinants of vaccine performance. Finally, we examine the emerging evidence for host genetic resilience to PPR, with emphasis on immunogenomic and transcriptomic findings and the relevance of indigenous breeds such as the Black Bengal goat as genomic resources. Current evidence suggests that genetic resilience to PPR is likely polygenic and remains insufficiently characterized, though genomic and transcriptomic tools offer opportunities to identify markers of reduced susceptibility, milder disease, or improved vaccine response. Sustainable control of PPR in goats will require integrated strategies combining mass vaccination, surveillance, improved husbandry, and host-focused immunogenomic research to strengthen herd resilience and accelerate progress toward global eradication.