Sleep is a growing area of research interest in medicine and neuroscience. Actually, one major concern is to find a correlation between several physiologic variables and sleep stages. There is a scientific agreement on the characteristics of the five stages of human sleep, based on EEG analysis. Nevertheless, manual stage classification is still the most widely used approach. This work proposes a new automatic sleep classification method based on unsupervised feature classification algorithms recently developed, and on EEG entropy measures. This scheme extracts entropy metrics from EEG records to obtain a feature vector. Then, these features are optimized in terms of relevance using the Q-α algorithm. Finally, the resulting set of features is entered into a clustering procedure to obtain a final segmentation of the sleep stages. The proposed method reached up to an average of 80% correctly classified stages for each patient separately while keeping the computational cost low.
Entropy estimation metrics have become a widely used method to identify subtle changes or hidden features in biomedical records. These methods have been more effective than conventional linear techniques in a number of signal classification applications, specially the healthy–pathological segmentation dichotomy. Nevertheless, a thorough characterization of these measures, namely, how to match metric and signal features, is still lacking. This paper studies a specific characterization problem: the influence of missing samples in biomedical records. The assessment is conducted using four of the most popular entropy metrics: Approximate Entropy, Sample Entropy, Fuzzy Entropy, and Detrended Fluctuation Analysis. The rationale of this study is that missing samples are a signal disturbance that can arise in many cases: signal compression, non-uniform sampling, or data transmission stages. It is of great interest to determine if these real situations can impair the capability of segmenting signal classes using such metrics. The experiments employed several biosignals: electroencephalograms, gait records, and RR time series. Samples of these signals were systematically removed, and the entropy computed for each case. The results showed that these metrics are robust against missing samples: With a data loss percentage of 50% or even higher, the methods were still able to distinguish among signal classes.
Atrial fibrillation (AF) is the most commonly clinically-encountered arrhythmia. Catheter ablation of AF is mainly based on trigger elimination and modification of the AF substrate. Substrate mapping ablation of complex fractionated atrial electrograms (CFAEs) has emerged to be a promising technique. To improve substrate mapping based on CFAE analysis, automatic detection algorithms need to be developed in order to simplify and accelerate the ablation procedures. According to the latest studies, the level of fractionation has been shown to be promisingly well estimated from CFAE measured during radio frequency (RF) ablation of AF. The nature of CFAE is generally nonlinear and nonstationary, so the use of complexity measures is considered to be the appropriate technique for the analysis of AF records. This work proposes the use of sample entropy (SampEn), not only as a way to discern between non-fractionated and fractionated atrial electrograms (A-EGM), Entropy 2015, 17 7494 but also as a tool for characterizing the degree of A-EGM regularity, which is linked to changes in the AF substrate and to heart tissue damage. The use of SampEn combined with a blind parameter estimation optimization process enables the classification between CFAE and non-CFAE with statistical significance (p < 0:001), 0.89 area under the ROC, 86% specificity and 77% sensitivity over a mixed database of A-EGM combined from two independent CFAE signal databases, recorded during RF ablation of AF in two EU countries (542 signals in total). On the basis of the results obtained in this study, it can be suggested that the use of SampEn is suitable for real-time support during navigation of RF ablation of AF, as only 1.5 seconds of signal segments need to be analyzed.
13 June 2018 in Computational and Mathematical Methods in Medicine
Most cardiac arrhythmias can be classified as atrial flutter, focal atrial tachycardia, or atrial fibrillation. They have been usually treated using drugs, but catheter ablation has proven more effective. This is an invasive method devised to destroy the heart tissue that disturbs correct heart rhythm. In order to accurately localise the focus of this disturbance, the acquisition and processing of atrial electrograms form the usual mapping technique. They can be single potentials, double potentials, or complex fractionated atrial electrogram (CFAE) potentials, and last ones are the most effective targets for ablation. The electrophysiological substrate is then localised by a suitable signal processing method. Sample Entropy is a statistic scarcely applied to electrograms but can arguably become a powerful tool to analyse these time series, supported by its results in other similar biomedical applications. However, the lack of an analysis of its dependence on the perturbations usually found in electrogram data, such as missing samples or spikes, is even more marked. This paper applied SampEn to the segmentation between non-CFAE and CFAE records and assessed its class segmentation power loss at different levels of these perturbations. The results confirmed that SampEn was able to significantly distinguish between non-CFAE and CFAE records, even under very unfavourable conditions, such as 50% of missing data or 10% of spikes.
Hardware in the loop is a widely used technique in power electronics, allowing to test and debug in real time (RT) at a low cost. In this context, field-programmable gate arrays (FPGAs) play an important role due to the high-speed requirements of RT simulations, in which area optimization is also crucial. Both characteristics, area and speed, are affected by the numerical formats (NFs) and their rounding modes. Regarding FPGAs, Xilinx is one of the largest manufacturers in the world, offering Vivado as its main design suite, but it was not until the release of Vivado 2020.2 that support for the IEEE NF libraries of VHDL-2008 was included. This work presents an exhaustive evaluation of the performance of Vivado 2020.2 in terms of area and speed using the native IEEE libraries of VHDL-2008 regarding NF. Results show that even though fixed-point NFs optimize area and speed, if a user prefers the use of floating-point NFs, with this new release, it can be synthesized—which could not be done in previous versions of Vivado. Although support for the native IEEE libraries of VHDL-2008 was included in Vivado 2020.2, it still lacks some issues regarding NF conversion during synthesis while support for simulation is not yet included.