Shawn Paul Serbin

Dr. Shawn Paul Serbin

Environmental and Climate Sciences Department, Brookhaven National Laboratory, Upton, New York, USA
+1
orcid

Research Focus & Metrics

Academic Career Length

19Years (2008-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

View All Publications
18 September 2017 in Global Change Biology
Verified
Journal Article
Closed access
PDF file
RFRosie A. Fisher
Rosie A. Fisher
CKCharles D. Koven
Charles D. Koven
WAWilliam R. L. Anderegg
William R. L. Anderegg
BCBradley O. Christoffersen
Bradley O. Christoffersen
Michael DietzeMichael Dietze
Michael Dietze
PMPaul R. Moorcroft
Paul R. Moorcroft

28 November 2016 in New Phytologist
Verified
Journal Article
Open access
PDF file
ARAlistair Rogers
Alistair Rogers
PMProfessor Belinda Medlyn
Professor Belinda Medlyn
JDJeffrey S. Dukes
Jeffrey S. Dukes
GBGordon Bonan
Gordon Bonan
SCSusanne von Caemmerer
Susanne von Caemmerer
SZSönke Zaehle
Sönke Zaehle
Summary: Accurate representation of photosynthesis in terrestrial biosphere models (TBMs) is essential for robust projections of global change. However, current representations vary markedly between TBMs, contributing uncertainty to projections of global carbon fluxes. Here we compared the representation of photosynthesis in seven TBMs by examining leaf and canopy level responses of photosynthetic CO2 assimilation (A) to key environmental variables: light, temperature, CO2 concentration, vapor pressure deficit and soil water content. We identified research areas where limited process knowledge prevents inclusion of physiological phenomena in current TBMs and research areas where data are urgently needed for model parameterization or evaluation. We provide a roadmap for new science needed to improve the representation of photosynthesis in the next generation of terrestrial biosphere and Earth system models.

1 May 2021 in Remote Sensing of Environment
Verified
Journal Article
Open access
KCKerry Cawse-Nicholson
Kerry Cawse-Nicholson
PTPhilip A. Townsend
Philip A. Townsend
DSDavid Schimel
David Schimel
AAAli M Assiri
Ali M Assiri
PBPamela L. Blake
Pamela L. Blake
QZQingyuan Zhang
Qingyuan Zhang

1 October 2014 in Ecological Applications
Verified
Journal Article
Open access
PDF file
SSShawn Paul Serbin
Shawn Paul Serbin
Aditya SinghAditya Singh
Aditya Singh
BMBrenden E. McNeil
Brenden E. McNeil
CKClayton C. Kingdon
Clayton C. Kingdon
PTPhilip Townsend
Philip Townsend
The morphological and biochemical properties of plant canopies are strong predictors of photosynthetic capacity and nutrient cycling. Remote sensing research at the leaf and canopy scales has demonstrated the ability to characterize the biochemical status of vegetation canopies using reflectance spectroscopy, including at the leaf level and canopy level from air‐ and spaceborne imaging spectrometers. We developed a set of accurate and precise spectroscopic calibrations for the determination of leaf chemistry (contents of nitrogen, carbon, and fiber constituents), morphology (leaf mass per area, Marea), and isotopic composition (δ15N) of temperate and boreal tree species using spectra of dried and ground leaf material. The data set consisted of leaves from both broadleaf and needle‐leaf conifer species and displayed a wide range in values, determined with standard analytical approaches: 0.7–4.4% for nitrogen (Nmass), 42–54% for carbon (Cmass), 17–58% for fiber (acid‐digestible fiber, ADF), 7–44% for lignin (acid‐digestible lignin, ADL), 3–31% for cellulose, 17–265 g/m2 for Marea, and −9.4‰ to 0.8‰ for δ15N. The calibrations were developed using a partial least‐squares regression (PLSR) modeling approach combined with a novel uncertainty analysis. Our PLSR models yielded model calibration (independent validation shown in parentheses) R2 and the root mean square error (RMSE) values, respectively, of 0.98 (0.97) and 0.10% (0.13%) for Nmass, R2 = 0.77 (0.73) and RMSE = 0.88% (0.95%) for Cmass, R2 = 0.89 (0.84) and RMSE = 2.8% (3.4%) for ADF, R2 = 0.77 (0.69) and RMSE = 2.4% (3.9%) for ADL, R2 = 0.77 (0.72) and RMSE = 1.4% (1.9%) for leaf cellulose, R2 = 0.62 (0.60) and RMSE = 0.91‰ (1.5‰) for δ15N, and R2 = 0.88 (0.87) with RMSE = 17.2 g/m2 (22.8 g/m2) for Marea. This study demonstrates the potential for rapid and accurate estimation of key foliar traits of forest canopies that are important for ecological research and modeling activities, with a single calibration equation valid over a wide range of northern temperate and boreal species and leaf physiognomies. The results provide the basis to characterize important variability between and within species, and across ecological gradients using a rapid, cost‐effective, easily replicated method.

6 October 2011 in Journal of Experimental Botany
Verified
Journal Article
Open access
PDF file
SSShawn Paul Serbin
Shawn Paul Serbin
DDDylan N. Dillaway
Dylan N. Dillaway
EKEric L. Kruger
Eric L. Kruger
PTPhilip Townsend
Philip Townsend
Researchers from a number of disciplines have long sought the ability to estimate the functional attributes of plant canopies, such as photosynthetic capacity, using remotely sensed data. To date, however, this goal has not been fully realized. In this study, fresh-leaf reflectance spectroscopy (λ=450–2500 nm) and a partial least-squares regression (PLSR) analysis were used to estimate key determinants of photosynthetic capacity—namely the maximum rates of RuBP carboxylation (Vcmax) and regeneration (Jmax)—measured with standard gas exchange techniques on leaves of trembling aspen and eastern cottonwood trees. The trees were grown across an array of glasshouse temperature regimes. The PLSR models yielded accurate and precise estimates of Vcmax and Jmax within and across species and glasshouse temperatures. These predictions were developed using unique contributions from different spectral regions. Most of the wavelengths selected were correlated with known absorption features related to leaf water content, nitrogen concentration, internal structure, and/or photosynthetic enzymes. In a field application of our PLSR models, spectral reflectance data effectively captured the short-term temperature sensitivities of Vcmax and Jmax in aspen foliage. These findings highlight a promising strategy for developing remote sensing methods to characterize dynamic, environmentally sensitive aspects of canopy photosynthetic metabolism at broad scales.

22 December 2017 in Journal of Experimental Botany
Verified
Journal Article
Open access
PDF file
VSViridiana Silva-Perez
Viridiana Silva-Perez
Gemma MoleroGemma Molero
Gemma Molero
SSShawn Paul Serbin
Shawn Paul Serbin
ACAnthony G Condon
Anthony G Condon
MRMatthew Reynolds
Matthew Reynolds
JEJohn R Evans
John R Evans
Improving photosynthesis to raise wheat yield potential has emerged as a major target for wheat physiologists. Photosynthesis-related traits, such as nitrogen per unit leaf area (Narea) and leaf dry mass per area (LMA), require laborious, destructive, laboratory-based methods, while physiological traits underpinning photosynthetic capacity, such as maximum Rubisco activity normalized to 25 °C (Vcmax25) and electron transport rate (J), require time-consuming gas exchange measurements. The aim of this study was to assess whether hyperspectral reflectance (350–2500 nm) can be used to rapidly estimate these traits on intact wheat leaves. Predictive models were constructed using gas exchange and hyperspectral reflectance data from 76 genotypes grown in glasshouses with different nitrogen levels and/or in the field under yield potential conditions. Models were developed using half of the observed data with the remainder used for validation, yielding correlation coefficients (R2 values) of 0.62 for Vcmax25, 0.7 for J, 0.81 for SPAD, 0.89 for LMA, and 0.93 for Narea, with bias <0.7%. The models were tested on elite lines and landraces that had not been used to create the models. The bias varied between −2.3% and −5.5% while relative error of prediction was similar for SPAD but slightly greater for LMA and Narea.