Aditya Singh

Dr. Aditya Singh

Department of Agricultural and Biological Engineering, University of Florida, Gainesville, FL 32611, USA
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Research Focus & Metrics

Academic Career Length

18Years (2009-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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1 October 2014 in Ecological Applications
Verified
Journal Article
Open access
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SSShawn Paul Serbin
Shawn Paul Serbin
Aditya SinghAditya Singh
Aditya Singh
BMBrenden E. McNeil
Brenden E. McNeil
CKClayton C. Kingdon
Clayton C. Kingdon
PTPhilip Townsend
Philip Townsend
The morphological and biochemical properties of plant canopies are strong predictors of photosynthetic capacity and nutrient cycling. Remote sensing research at the leaf and canopy scales has demonstrated the ability to characterize the biochemical status of vegetation canopies using reflectance spectroscopy, including at the leaf level and canopy level from air‐ and spaceborne imaging spectrometers. We developed a set of accurate and precise spectroscopic calibrations for the determination of leaf chemistry (contents of nitrogen, carbon, and fiber constituents), morphology (leaf mass per area, Marea), and isotopic composition (δ15N) of temperate and boreal tree species using spectra of dried and ground leaf material. The data set consisted of leaves from both broadleaf and needle‐leaf conifer species and displayed a wide range in values, determined with standard analytical approaches: 0.7–4.4% for nitrogen (Nmass), 42–54% for carbon (Cmass), 17–58% for fiber (acid‐digestible fiber, ADF), 7–44% for lignin (acid‐digestible lignin, ADL), 3–31% for cellulose, 17–265 g/m2 for Marea, and −9.4‰ to 0.8‰ for δ15N. The calibrations were developed using a partial least‐squares regression (PLSR) modeling approach combined with a novel uncertainty analysis. Our PLSR models yielded model calibration (independent validation shown in parentheses) R2 and the root mean square error (RMSE) values, respectively, of 0.98 (0.97) and 0.10% (0.13%) for Nmass, R2 = 0.77 (0.73) and RMSE = 0.88% (0.95%) for Cmass, R2 = 0.89 (0.84) and RMSE = 2.8% (3.4%) for ADF, R2 = 0.77 (0.69) and RMSE = 2.4% (3.9%) for ADL, R2 = 0.77 (0.72) and RMSE = 1.4% (1.9%) for leaf cellulose, R2 = 0.62 (0.60) and RMSE = 0.91‰ (1.5‰) for δ15N, and R2 = 0.88 (0.87) with RMSE = 17.2 g/m2 (22.8 g/m2) for Marea. This study demonstrates the potential for rapid and accurate estimation of key foliar traits of forest canopies that are important for ecological research and modeling activities, with a single calibration equation valid over a wide range of northern temperate and boreal species and leaf physiognomies. The results provide the basis to characterize important variability between and within species, and across ecological gradients using a rapid, cost‐effective, easily replicated method.

1 December 2015 in Ecological Applications
Verified
Journal Article
Open access
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Aditya SinghAditya Singh
Aditya Singh
SSShawn Paul Serbin
Shawn Paul Serbin
BMBrenden E. McNeil
Brenden E. McNeil
CKClayton C. Kingdon
Clayton C. Kingdon
PTPhilip Townsend
Philip Townsend
A major goal of remote sensing is the development of generalizable algorithms to repeatedly and accurately map ecosystem properties across space and time. Imaging spectroscopy has great potential to map vegetation traits that cannot be retrieved from broadband spectral data, but rarely have such methods been tested across broad regions. Here we illustrate a general approach for estimating key foliar chemical and morphological traits through space and time using NASA's Airborne Visible/Infrared Imaging Spectrometer (AVIRIS‐Classic). We apply partial least squares regression (PLSR) to data from 237 field plots within 51 images acquired between 2008 and 2011. Using a series of 500 randomized 50/50 subsets of the original data, we generated spatially explicit maps of seven traits (leaf mass per area (Marea), percentage nitrogen, carbon, fiber, lignin, and cellulose, and isotopic nitrogen concentration, δ15N) as well as pixel‐wise uncertainties in their estimates based on error propagation in the analytical methods. BothMareaand %N PLSR models had aR2> 0.85. Root mean square errors (RMSEs) for both variables were less than 9% of the range of data. Fiber and lignin were predicted withR2> 0.65 and carbon and cellulose withR2> 0.45. AlthoughR2of %C and cellulose were lower thanMareaand %N, the measured variability of these constituents (especially %C) was also lower, and their RMSE values were beneath 12% of the range in overall variability. Model performance for δ15N was the lowest (R2= 0.48, RMSE = 0.95‰), but within 15% of the observed range. The resulting maps of chemical and morphological traits, together with their overall uncertainties, represent a first‐of‐its‐kind approach for examining the spatiotemporal patterns of forest functioning and nutrient cycling across a broad range of temperate and sub‐boreal ecosystems. These results offer an alternative to categorical maps of functional or physiognomic types by providing non‐discrete maps (i.e., on a continuum) of traits that define those functional types. A key contribution of this work is the ability to assign retrieval uncertainties by pixel, a requirement to enable assimilation of these data products into ecosystem modeling frameworks to constrain carbon and nutrient cycling projections.

28 May 2020 in New Phytologist
Verified
Journal Article
Closed access
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ZWZhihui Wang
Zhihui Wang
ACAdam Chlus
Adam Chlus
RGRyan Geygan
Ryan Geygan
ZYZhiwei Ye
Zhiwei Ye
TZTing Zheng
Ting Zheng
PTPhilip Townsend
Philip Townsend

1 May 2016 in Environmental Research Letters
Verified
Journal Article
Open access
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SZSamuel Zipper
Samuel Zipper
JSJason Schatz
Jason Schatz
Aditya SinghAditya Singh
Aditya Singh
CKChris Kucharik
Chris Kucharik
PTPhilip Townsend
Philip Townsend
SLSteven P Loheide
Steven P Loheide

1 September 2015 in Remote Sensing of Environment
Verified
Journal Article
Closed access
SSShawn Paul Serbin
Shawn Paul Serbin
Aditya SinghAditya Singh
Aditya Singh
ADAnkur Desai
Ankur Desai
SDSean G. Dubois
Sean G. Dubois
AJAndrew D. Jablonski
Andrew D. Jablonski
PTPhilip Townsend
Philip Townsend

9 March 2016 in Remote Sensing
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Journal Article
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JCJeannine Cavender-Bares
Jeannine Cavender-Bares
JMJose Eduardo Meireles
Jose Eduardo Meireles
JCJohn Couture
John Couture
MKMatthew Kaproth
Matthew Kaproth
CKClayton C. Kingdon
Clayton C. Kingdon
PTPhilip Townsend
Philip Townsend
Species and phylogenetic lineages have evolved to differ in the way that they acquire and deploy resources, with consequences for their physiological, chemical and structural attributes, many of which can be detected using spectral reflectance form leaves. Recent technological advances for assessing optical properties of plants offer opportunities to detect functional traits of organisms and differentiate levels of biological organization across the tree of life. Here, we connect leaf-level full range spectral data (400–2400 nm) of leaves to the hierarchical organization of plant diversity within the oak genus (Quercus) using field and greenhouse experiments in which environmental factors and plant age are controlled. We show that spectral data significantly differentiate populations within a species and that spectral similarity is significantly associated with phylogenetic similarity among species. We further show that hyperspectral information allows more accurate classification of taxa than spectrally-derived traits, which by definition are of lower dimensionality. Finally, model accuracy increases at higher levels in the hierarchical organization of plant diversity, such that we are able to better distinguish clades than species or populations. This pattern supports an evolutionary explanation for the degree of optical differentiation among plants and demonstrates potential for remote detection of genetic and phylogenetic diversity.