Heli Li

Dr. Heli Li


Research Focus & Metrics

Academic Career Length

8Years (2019-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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28 February 2023 in Remote Sensing
Verified
Journal Article
Open access
PDF file
HXHanyu Xue
Hanyu Xue
XXXingang Xu
Xingang Xu
QZqingzhen zhu
qingzhen zhu
GYGuijun Yang
Guijun Yang
HLHuiling Long
Huiling Long
YLYafeng Li
Yafeng Li
The resulting maps of land use classification obtained by pixel-based methods often have salt-and-pepper noise, which usually shows a certain degree of cluttered distribution of classification image elements within the region. This paper carries out a study on crop classification and identification based on time series Sentinel images and object-oriented methods and takes the crop recognition and classification of the National Modern Agricultural Industrial Park in Jalaid Banner, Inner Mongolia, as the research object. It uses the Google Earth Engine (GEE) cloud platform to extract time series Sentinel satellite radar and optical remote sensing images combined with simple noniterative clustering (SNIC) multiscale segmentation with random forest (RF) and support vector machine (SVM) classification algorithms to classify and identify major regional crops based on radar and spectral features. Compared with the pixel-based method, the combination of SNIC multiscale segmentation and random forest classification based on time series radar and optical remote sensing images can effectively reduce the salt-and-pepper phenomenon in classification and improve crop classification accuracy with the highest accuracy of 98.66 and a kappa coefficient of 0.9823. This study provides a reference for large-scale crop identification and classification work.

31 August 2023 in Remote Sensing
Verified
Journal Article
Open access
PDF file
PRpengting ren
pengting ren
HLHeli Li
Heli Li
SHShaoyu Han
Shaoyu Han
RCRiqiang Chen
Riqiang Chen
GYGuijun Yang
Guijun Yang
CZChunjiang Zhao
Chunjiang Zhao
Accurate and rapid estimation of the crop yield is essential to precision agriculture. Critical to crop improvement, yield is a primary index for selecting excellent genotypes in crop breeding. Recently developed unmanned aerial vehicle (UAV) platforms and advanced algorithms can provide powerful tools for plant breeders. Genotype category information such as the maturity group information (M) can significantly influence soybean yield estimation using remote sensing data. The objective of this study was to improve soybean yield prediction by combining M with UAV-based multi-sensor data using machine learning methods. We investigated three types of maturity groups (Early, Median and Late) of soybean, and collected the UAV-based hyperspectral and red–green–blue (RGB) images at three key growth stages. Vegetation indices (VI) and texture features (Te) were extracted and combined with M to predict yield using partial least square regression (PLSR), Gaussian process regression (GPR), random forest regression (RFR) and kernel ridge regression (KRR). The results showed that (1) the method of combining M with remote sensing data could significantly improve the estimation performances of soybean yield. (2) The combinations of three variables (VI, Te and M) gave the best estimation accuracy. Meanwhile, the flowering stage was the optimal single time point for yield estimation (R2 = 0.689, RMSE = 408.099 kg/hm2), while using multiple growth stages produced the best estimation performance (R2 = 0.700, RMSE = 400.946 kg/hm2). (3) By comparing the models constructed by different algorithms for different growth stages, it showed that the models built by GPR showed the best performances. Overall, the results of this study provide insights into soybean yield estimation based on UAV remote sensing data and maturity information.

28 May 2019 in Plant Methods
Verified
Journal Article
Open access
PDF file
Liang HanLiang Han
Liang Han
GYGuijun Yang
Guijun Yang
Huayang DaiHuayang Dai
Huayang Dai
Hao YangHao Yang
Hao Yang
BXBo Xu
Bo Xu
CZChunjiang Zhao
Chunjiang Zhao
With environmental deterioration, natural resource scarcity, and rapid population growth, mankind is facing severe global food security problems. To meet future needs, it is necessary to accelerate progress in breeding for new varieties with high yield and strong resistance. However, the traditional phenotypic screening methods have some disadvantages, such as destructive, inefficient, low-dimensional, labor-intensive and cumbersome, which seriously hinder the development of field breeding. Breeders urgently need a high-throughput technique for acquiring and evaluating phenotypic data that can efficiently screen out excellent phenotypic traits from large-scale genotype populations. In the present study, we used an unmanned aerial vehicle (UAV) high-throughput phenotyping (HTP) platform to collect RGB and multispectral images for a breeding program and acquired multiple phenotypic components (or traits), such as plant height, normalized difference vegetation index, biomass accumulation, plant-height growth rate, lodging, and leaf color. By implementing self-organizing maps and principal components analysis biplots to establish phenotypic map and similarity, we proposed an UAV-assisted HTP framework for preselecting maize (Zee mays L.) phenotypic components (or traits). This framework gives breeders additional information to allow them to quickly identify and preselect plants that have genotypes conferring desirable phenotypic components out of thousands of field plots. The present study also demonstrates that remote sensing is a powerful tool with which to acquire abundant phenotypic components. By using these rich phenotypic components, breeders should be able to more effectively identify and select superior genotypes.

18 November 2024 in Remote Sensing
Verified
Journal Article
Open access
PDF file
WCWeinan Chen
Weinan Chen
GYGuijun Yang
Guijun Yang
YMYang Meng
Yang Meng
Haikuan FengHaikuan Feng
Haikuan Feng
HLHeli Li
Heli Li
Zhenhong LiZhenhong Li
Zhenhong Li
The timely and precise estimation of stem biomass is critical for monitoring the crop growing status. Optical remote sensing is limited by the penetration of sunlight into the canopy depth, and thus directly estimating winter wheat stem biomass via canopy spectra remains a difficult task. There is a stable linear relationship between the stem dry biomass (SDB) and leaf dry biomass (LDB) of winter wheat during the entire growth stage. Therefore, this study comprehensively considered remote sensing and crop phenology, as well as biomass allocation laws, to establish a novel two-component (LDB, SDB) and two-parameter (phenological variables, spectral vegetation indices) stratified model (Tc/Tp-SDB) to estimate SDB across the growth stages of winter wheat. The core of the Tc/Tp-SDB model employed phenological variables (e.g., effective accumulative temperature, EAT) to correct the SDB estimations determined from the LDB. In particular, LDB was estimated using spectral vegetation indices (e.g., red-edge chlorophyll index, CIred edge). The results revealed that the coefficient values (β0 and β1) of ordinary least squares regression (OLSR) of SDB with LDB had a strong relationship with phenological variables. These coefficient (β0 and β1) relationships were used to correct the OLSR model parameters based on the calculated phenological variables. The EAT and CIred edge were determined as the optimal parameters for predicting SDB with the novel Tc/Tp-SDB model, with r, RMSE, MAE, and distance between indices of simulation and observation (DISO) values of 0.85, 1.28 t/ha, 0.95 t/ha, and 0.31, respectively. The estimation error of SDB showed an increasing trend from the jointing to flowering stages. Moreover, the proposed model showed good potential for estimating SDB from UAV hyperspectral imagery. This study demonstrates the ability of the Tc/Tp-SDB model to accurately estimate SDB across different growing seasons and growth stages of winter wheat.

18 February 2025 in Remote Sensing
Verified
Journal Article
Open access
PDF file
CYChen Yang
Chen Yang
GYGuijun Yang
Guijun Yang
HWHaorang Wang
Haorang Wang
SLSimeng Li
Simeng Li
JZJiaoping Zhang
Jiaoping Zhang
HLHeli Li
Heli Li
The breeding of high-yield varieties is a core objective of soybean breeding programs, and phenotypic trait-based selection offers an effective pathway to achieve this goal. The aim of this study was to identify the key phenotypic traits of high-yield soybean varieties and to utilize these traits for screening high-yield soybean varieties. In this study, the UAV (unmanned aerial vehicle)- and field-based phenotypic data were collected from 1923 and 1015 soybean breeding plots at the Xuzhou experimental site in 2022 and 2023, respectively. First, the soybean varieties were grouped by using a self-organizing map and K-means clustering to investigate the relationships between various traits and soybean yield and to identify the key ones for selecting high-yield soybean varieties. It was shown that the duration of canopy coverage remaining above 90% (Tcc90) was a critical phenotypic trait for selecting high-yield varieties. Moreover, high-yield soybean varieties typically exhibited several key phenotypic traits such as rapid development of canopy coverage (Tcc90r, the time when canopy coverage first reached 90%), prolonged duration of high canopy coverage (Tcc90), a delayed decline in canopy coverage (Tcc90d, the time when canopy coverage began to decline below 90%), and moderate-to-high plant height (PH) and hundred-grain weight (HGW). Based on these findings, a method for screening high-yield soybean varieties was proposed, through which 87% and 72% of high-yield varieties (top 5%) in 2022 and 2023, respectively, were successfully selected. Additionally, about 9% (in 2022) and 10% (in 2023) of the low-yielding (bottom 60%) were misclassified as high-yielding. This study demonstrates the benefit of high-throughput phenotyping for soybean yield-related traits and variety screening and provides helpful insights into identifying high-yield soybean varieties in breeding programs.

18 November 2023 in Remote Sensing
Verified
Journal Article
Open access
PDF file
DPDi Pan
Di Pan
CLChangchun Li
Changchun Li
GYGuijun Yang
Guijun Yang
PRpengting ren
pengting ren
YMYuanyuan Ma
Yuanyuan Ma
HLHeli Li
Heli Li
Accurate and high-throughput identification of the initial anthesis of soybean varieties is important for the breeding and screening of high-quality soybean cultivars in field trials. The objectives of this study were to identify the initial day of anthesis (IADAS) of soybean varieties based on remote sensing multispectral time-series images acquired by unmanned aerial vehicles (UAVs), and analyze the differences in the initial anthesis of the same soybean varieties between two different climatic regions, Shijiazhuang (SJZ) and Xuzhou (XZ). First, the temporal dynamics of several key crop growth indicators and spectral indices were analyzed to find an effective indicator that favors the identification of IADAS, including leaf area index (LAI), above-ground biomass (AGB), canopy height (CH), normalized-difference vegetation index (NDVI), red edge chlorophyll index (CIred edge), green normalized-difference vegetation index (GNDVI), enhanced vegetation index (EVI), two-band enhanced vegetation index (EVI2) and normalized-difference red-edge index (NDRE). Next, this study compared several functions, like the symmetric gauss function (SGF), asymmetric gauss function (AGF), double logistic function (DLF), and fourier function (FF), for time-series curve fitting, and then estimated the IADAS of soybean varieties with the first-order derivative maximal feature (FDmax) of the CIred edge phenology curves. The relative thresholds of the CIred edge curves were also used to estimate IADAS, in two ways: a single threshold for all of the soybean varieties, and three different relative thresholds for early, middle, and late anthesis varieties, respectively. Finally, this study presented the variations in the IADAS of the same soybean varieties between two different climatic regions and discussed the probable causal factors. The results showed that CIred edge was more suitable for soybean IADAS identification compared with the other investigated indicators because it had no saturation during the whole crop lifespan. Compared with DLF, AGF and FF, SGF provided a better fitting of the CIred edge time-series curves without overfitting problems, although the coefficient of determination (R2) and root mean square error (RMSE) were not the best. The FDmax of the SGF-fitted CIred edge curve (SGF_CIred edge) provided good estimates of the IADAS, with an RMSE and mean average error (MAE) of 3.79 days and 3.00 days, respectively. The SGF-fitted_CIred edge curve can be used to group the soybean varieties into early, middle and late groups. Additionally, the accuracy of the IADAS was improved (RMSE = 3.69 days and MAE = 3.09 days) by using three different relative thresholds (i.e., RT50, RT55, RT60) for the three flowering groups compared to when using a single threshold (RT50). In addition, it was found that the IADAS of the same soybean varieties varied greatly when planted in two different climatic regions due to the genotype–environment interactions. Overall, this study demonstrated that the IADAS of soybean varieties can be identified efficiently and accurately based on UAV remote sensing multispectral time-series data.