Marzhan Sypabekova

Dr. Marzhan Sypabekova

orcid

Research Focus & Metrics

Academic Career Length

14Years (2013-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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24 August 2020 in IEEE Access
Verified
Journal Article
Open access
Daniela Lo PrestiDaniela Lo Presti
Daniela Lo Presti
Carlo MassaroniCarlo Massaroni
Carlo Massaroni
Catia LeitaoCatia Leitao
Catia Leitao
Maria de Fátima DominguesMaria de Fátima Domingues
Maria de Fátima Domingues
MSMarzhan Sypabekova
Marzhan Sypabekova
Emiliano SchenaEmiliano Schena
Emiliano Schena
In the last decades, fiber Bragg gratings (FBGs) have become increasingly attractive to medical applications due to their unique properties such as small size, biocompatibility, immunity to electromagnetic interferences, high sensitivity and multiplexing capability. FBGs have been employed in the development of surgical tools, assistive devices, wearables, and biosensors, showing great potentialities for medical uses. This paper reviews the FBG-based measuring systems, their principle of work, and their applications in medicine and healthcare. Particular attention is given to sensing solutions for biomechanics, minimally invasive surgery, physiological monitoring, and medical biosensing. Strengths, weaknesses, open challenges, and future trends are also discussed to highlight how FBGs can meet the demands of nextgeneration medical devices and healthcare system.

27 December 2022 in Biosensors
Verified
Journal Article
Open access
PDF file
MSMarzhan Sypabekova
Marzhan Sypabekova
AHAidan Hagemann
Aidan Hagemann
DRDonggee Rho
Donggee Rho
Seunghyun KimSeunghyun Kim
Seunghyun Kim
Surface functionalization and bioreceptor immobilization are critical processes in developing a highly sensitive and selective biosensor. The silanization process with 3-aminopropyltriethoxysilane (APTES) on oxide surfaces is frequently used for surface functionalization because of beneficial characteristics such as its bifunctional nature and low cost. Optimizing the deposition process of the APTES layer to obtain a monolayer is crucial to having a stable surface and effectively immobilizing the bioreceptors, which leads to the improved repeatability and sensitivity of the biosensor. This review provides an overview of APTES deposition methods, categorized into the solution-phase and vapor-phase, and a comprehensive summary and guide for creating stable APTES monolayers on oxide surfaces for biosensing applications. A brief explanation of APTES is introduced, and the APTES deposition methods with their pre/post-treatments and characterization results are discussed. Lastly, APTES deposition methods on nanoparticles used for biosensors are briefly described.

1 December 2019 in Biosensors and Bioelectronics
Verified
Journal Article
Closed access
MSMarzhan Sypabekova
Marzhan Sypabekova
SKSanzhar Korganbayev
Sanzhar Korganbayev
AGAlvaro Gonzalez-Vila
Alvaro Gonzalez-Vila
CCChristophe Caucheteur
Christophe Caucheteur
MSMadina Shaimerdenova
Madina Shaimerdenova
DTDaniele Tosi
Daniele Tosi

6 December 2018 in Sensors
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Journal Article
Open access
PDF file
ABAliya Bekmurzayeva
Aliya Bekmurzayeva
KDKanat Dukenbayev
Kanat Dukenbayev
MSMadina Shaimerdenova
Madina Shaimerdenova
IBIldar Bekniyazov
Ildar Bekniyazov
TATakhmina Ayupova
Takhmina Ayupova
Daniele TosiDaniele Tosi
Daniele Tosi
A biosensor based on an etched Fiber Bragg Grating (EFBG) for thrombin detection is reported. The sensing system is based on a Fiber Bragg Grating (FBG) with a Bragg wavelength of 1550 nm, wet-etched in hydrofluoric acid (HF) for ~27 min, to achieve sensitivity to a refractive index (RI) of 17.4 nm/RIU (refractive index unit). Subsequently, in order to perform a selective detection of thrombin, the EFBG has been functionalized with silane-coupling agent 3-(aminopropyl)triethoxysilane (APTES) and a cross-linker, glutaraldehyde, for the immobilization of thrombin-binding aptamer. The biosensor has been validated for thrombin detection in concentrations ranging from 10 nM to 80 nM. The proposed sensor presents advantages with respect to other sensor configurations, based on plasmonic resonant tilted FBG or Long Period Grating (LPG), for thrombin detection. Firstly, fabricating an EFBG only requires chemical etching. Moreover, the functionalization method used in this study (silanization) allows the avoidance of complicated and expensive fabrications, such as thin film sputtering or chemical vapor deposition. Due to their characteristics, EFBG sensors are easier to multiplex and can be used in vivo. This opens new possibilities for the detection of thrombin in clinical settings.

1 July 2013 in Tuberculosis
Verified
Journal Article
Closed access
ABAliya Bekmurzayeva
Aliya Bekmurzayeva
MSMarzhan Sypabekova
Marzhan Sypabekova
DKDamira Kanayeva
Damira Kanayeva

1 May 2017 in Tuberculosis
Verified
Journal Article
Open access
MSMarzhan Sypabekova
Marzhan Sypabekova
ABAliya Bekmurzayeva
Aliya Bekmurzayeva
RWRonghui Wang
Ronghui Wang
Yanbin LiYanbin Li
Yanbin Li
CNClaude Nogues
Claude Nogues
DKDamira Kanayeva
Damira Kanayeva
Rapid detection of Mycobacterium tuberculosis (Mtb), an etiological agent of tuberculosis (TB), is important for global control of this disease. Aptamers have emerged as a potential rival for antibodies in therapeutics, diagnostics and biosensing due to their inherent characteristics. The aim of the current study was to select and characterize single-stranded DNA aptamers against MPT64 protein, one of the predominant secreted proteins of Mtb pathogen. Aptamers specific to MPT64 protein were selected in vitro using systematic evolution of ligands through exponential enrichment (SELEX) method. The selection was started with a pool of ssDNA library with randomized 40-nucleotide region. A total of 10 cycles were performed and seventeen aptamers with unique sequences were identified by sequencing. Dot Blot analysis was performed to monitor the SELEX process and to conduct the preliminary tests on the affinity and specificity of aptamers. Enzyme linked oligonucleotide assay (ELONA) showed that most of the aptamers were specific to the MPT64 protein with a linear correlation of R2 = 0.94 for the most selective. Using Surface Plasmon Resonance (SPR), dissociation equilibrium constant KD of 8.92 nM was obtained. Bioinformatics analysis of the most specific aptamers revealed the existence of a conserved as well as distinct sequences and possible binding site on MPT64. The specificity was determined by testing non-target ESAT-6 and CFP-10. Negligible cross-reactivity confirmed the high specificity of the selected aptamer. The selected aptamer was further tested on clinical sputum samples using ELONA and had sensitivity and specificity of 91.3% and 90%, respectively. Microscopy, culture positivity and nucleotide amplification methods were used as reference standards. The aptamers studied could be further used for the development of medical diagnostic tools and detection assays for Mtb.